BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005D01LP1|AL425360
(980 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1757 1915 0.0
>3x_Contig1757
Length = 24754
Score = 1915 bits (963), Expect = 0.0
Identities = 973/980 (99%)
Strand = Plus / Minus
Query: 1 aaatagagtnatctgcctttcaagcttacttattgggctggagagctatgccaaatcctg 60
||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 18257 aaatagagtaatctgcctttcaagctttcttattgggctggagagctatgccaaatcctg 18198
Query: 61 gtggtagagataatgatggtgatggtgatgcaggtactgaggtaggtaccgatggcgact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18197 gtggtagagataatgatggtgatggtgatgcaggtactgaggtaggtaccgatggcgact 18138
Query: 121 tttgtggtagtgatactggaatgtcacttgtagtaatcggttgggttggtttgactggtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18137 tttgtggtagtgatactggaatgtcacttgtagtaatcggttgggttggtttgactggtt 18078
Query: 181 tctgtggtggagacctgatcgatcttggtacgcctctactaggaccgccgcytcttatag 240
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 18077 tctgtggtggagacctgatcgatcttggtacgcctctactaggaccgccgcttcttatag 18018
Query: 241 taccagtagtggttctattatcattagtagttggtgtaagtattcctgtagcctgatatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18017 taccagtagtggttctattatcattagtagttggtgtaagtattcctgtagcctgatatg 17958
Query: 301 agggagatgctttaggttttatcactgggacgttgatacttctcgatatttcgttgtccg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17957 agggagatgctttaggttttatcactgggacgttgatacttctcgatatttcgttgtccg 17898
Query: 361 tgtcagtacgtgcmggaacgattggtgtatctatgatcytcgtgaaatctttactttcca 420
||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 17897 tgtcagtacgtgcaggaacgattggtgtatctatgatcttcgtgaaatctttactttcca 17838
Query: 421 gttcttgtgatttagattgttccgtcttcaactgttgtacatgtcttttctgtatttgtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17837 gttcttgtgatttagattgttccgtcttcaactgttgtacatgtcttttctgtatttgtg 17778
Query: 481 atacaatgttgttgaacgaattagaataggagttgaattgcgaggtattaagcgttgggg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17777 atacaatgttgttgaacgaattagaataggagttgaattgcgaggtattaagcgttgggg 17718
Query: 541 ccattgagaatgcgaacattagcgggatgaacgattctgtgatgagttcttctttgtctt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17717 ccattgagaatgcgaacattagcgggatgaacgattctgtgatgagttcttctttgtctt 17658
Query: 601 ggatagcygtgtataaatgtgggaagaattctaggaatttcattagaatccgtgagtctc 660
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17657 ggatagctgtgtataaatgtgggaagaattctaggaatttcattagaatccgtgagtctc 17598
Query: 661 tactcttcattgattttatcaatgggaacaacgtctcttggatcatgtaggtatccattg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17597 tactcttcattgattttatcaatgggaacaacgtctcttggatcatgtaggtatccattg 17538
Query: 721 cgttggattggatcatagtttggaagcaagatatgcatgcatttttcacagtcaggctag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17537 cgttggattggatcatagtttggaagcaagatatgcatgcatttttcacagtcaggctag 17478
Query: 781 tcgtctttgtaaacaatttctgtatcaatggggatagaaagttctttaccgtagcgaaat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17477 tcgtctttgtaaacaatttctgtatcaatggggatagaaagttctttaccgtagcgaaat 17418
Query: 841 cgaatgtttctaatgcaatgggcaactgatttagtaggctctcttgtatgttagggtttt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17417 cgaatgtttctaatgcaatgggcaactgatttagtaggctctcttgtatgttagggtttt 17358
Query: 901 cttgcgattcgcatgtatattcgtataatggtttcaataatgatttatcaaatgcgtccy 960
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17357 cttgcgattcgcatgtatattcgtataatggtttcaataatgatttatcaaatgcgtcct 17298
Query: 961 tctttagttttatttgtagg 980
||||||||||||||||||||
Sbjct: 17297 tctttagttttatttgtagg 17278
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6487
Number of Sequences: 1807
Number of extensions: 6487
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 980
length of database: 10,358,551
effective HSP length: 16
effective length of query: 964
effective length of database: 10,329,639
effective search space: 9957771996
effective search space used: 9957771996
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)